Stockholm Bioinformatics Center, SBC
Lecture notes: Molecular Bioinformatics 2001, Uppsala University

Lecture 19 Jan 2001 Per Kraulis

Sequence alignment: Pairwise and multiple

  1. Sequence alignments: why?
  2. Some definitions for sequence alignments
  3. Algorithm for sequence alignments: dynamic programming
  4. Database searching
  5. Multiple sequence alignments: why?
  6. An example of a multiple alignment
  7. How to generate a multiple alignment?
  8. Algorithmic complexity
  9. A standard multiple alignment program: ClustalW
  10. Databases of multiple alignments; domains

The 20 common amino acids, one-letter codes, formula, etc

Copyright © 2001 Per Kraulis $Date: 2001/01/19 13:18:36 $